Okay I have solved the problem(sort of) THE HARD WAY-by trial and error.
By the way,I have the 'poor man's install' so the xf86config is not saved. Anyone knows how to save it with the cd setup?
The steps:
1. had to delete the myconfig files and the persistent home(using win9.
2. boot to knoppix.This time the usb mouse worked.
3. do KNOPPIX/configuration-both persistent home and config files.
4. reboot knoppix.USB mouse now works.
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